ProcessSimStrat.Rd
Takes output from GetFossils
and places extinct lineages in the tree and produces a properly formatted table of stratigraphic intervals.
ProcessSimStrat(phy, f)
a complete phylogeny that includes both extant and extinct lineages.
the table of sampled lineages under the fossilized birth-death process obtained from GetFossils
.
Returns an object that contains:
a tree of extant taxa and sampled extinct tips.
a table of stratigraphic intervals, formatted to be input into MiSSE
, hisse
, MuHiSSE
.